Chromosome-specific Microsatellite Multiplex Sets for Linkage Studies in the Domestic Dog.

Note: There is a typo in the first paragraph of the results section. The paper states that FH3245 was not able to be coamplified or coloaded. This should be FH3327 instead of FH3245.

* Overlapping marker: Click here for suggested labels.

Marker Name - X: Markers that did not work with our conditions and were not included in multiplex panels.

Marker

CFA

PIC

Type

MSS-1 Mplex

MSS-2 Mplex

Observed Allele Sizes

Published

Collie

Boykin Spaniel (n=28)

German Shepherd (n=64)

Shetland Sheepdog (n=50)

Great Dane (n=46)

Collie (n=24)

Havanese (n=122)

C01.424

CFA01

0.73

di

02

1.1

186

187

184, 186

 

 176, 182, 186, 188      

FH2793

CFA01

0.78

di

 

1.1

208

212, 218

193, 211, 213

 

 195, 209, 211, 213, 215      

REN112I02

CFA01

0.76

di

 

1.1

250

263

256, 262, 264

252, 256, 258, 260, 264

 252, 254, 258, 260, 261, 262      

FH2326

CFA01

0.83

tetra

 

1.1

251

260, 278

252, 256, 262, 266, 270

255, 259, 263, 265, 267, 269, 271, 275

 254, 256, 258, 262, 266, 270      

FH3413

CFA01

0.72

tetra

 

1.1

374

356

351, 359, 363, 375, 379, 387, 391

361, 365, 369, 373, 377

 350, 354, 358, 362, 370, 382, 386      

C00901

CFA01

0.54

di

 

1.1

105

111

103, 109

103, 111

 101, 103, 109, 111      

REN143K19

CFA01

0.50

di

 

1.2

138

136

133, 135

134

 134, 136      

C01.251

CFA01

0.61

di

 

1.2

146

138, 140

132, 136, 138, 142

137

 132, 134, 136, 138, 146, 152      

FH3325

CFA01

0.82

tetra

 

1.2

407

375, 387

366, 374, 378, 386, 390, 394, 398

374, 378, 382, 384, 386, 388, 392

 373, 375, 379, 381, 385, 389, 393, 397      

FH2309

CFA01

0.88

tetra

17

1.2

380

400

361, 383, 387, 391, 399, 403, 407

357, 371, 375, 399, 403, 407, 411, 415,

342, 346, 384, 392, 400, 408, 412, 416      

FH3300

CFA01

0.81

tetra

 

1.2

456

450

436, 440

417, 437, 447, 451, 467

 394, 404, 439, 440, 444, 446      

FH2294

CFA01

0.87

tetra

08

1.3

227

225

213, 221, 225, 229, 233, 237, 241

 

        

FH2663

CFA01

0.88

tetra

 

1.3

229

230, 244

226, 228, 234, 236, 238, 244, 248

223, 234

 226, 230, 236, 240, 242, 246, 248, 252      

FH3603

CFA01

0.88

tetra

 

1.3

387

389, 397

344, 348, 352, 356, 380, 388, 392

316, 317, 320, 324, 343, 347, 358, 372, 375, 380

 350, 354, 358, 362, 376, 382, 386, 390, 394      

FH3922

CFA01

0.86

tetra

 

1.3

484

530

470, 482, 486, 524, 528, 532, 536, 540, 544, 554

458, 474, 478, 486, 490, 500, 506, 514, 538, 542, 544, 546, 548, 550

 466, 472, 474, 482, 486, 488, 490, 496, 516, 528, 538, 542, 546      

REN70M14

CFA02

0.64

di

 

2.1

232

209, 215

 

175

 201, 205, 207, 213, 215      

REN303H07

CFA02

0.72

di

 

2.1

345

347

 

 

 346      

FH3210

CFA02

0.76

tetra

 

2.1

375

359, 363

 

 

 298, 306, 320, 360, 364, 368      

FH3965

CFA02

0.85

tetra

 

2.1

414

393, 409

 

 

 400, 404, 408, 412, 416      

C02.609

CFA02

0.52

di

 

2.2

180

181

179,181

181

 181, 193, 195      

FH2613

CFA02

0.81

tetra

 

2.2

189

149, 181

167, 177, 181, 185

150, 180, 188, 208, 210

 153, 173, 177, 181, 183, 185, 187, 191, 195, 199      

FH2890

CFA02

0.65

di

 

2.2

198

195

190, 192, 194, 196

190, 194, 196

 193, 195      

FH2132

CFA02

0.85

tetra

22

2.2

272

169, 251

226, 272, 276, 338, 348

251, 255, 259, 263, 267, 273, 277, 335, 339

 251, 263, 267, 271, 273, 275, 277, 281, 285, 335, 336, 339, 343, 347      

C02.342

CFA02

0.77

di

21

2.3

184

185, 191

182, 184, 186, 188, 190